Home β€Ί Patient Stories β€Ί Non-Gonococcal Urethritis (Chlamydia trachomatis)
Men's Health Β· Sexual Health

The Burning on Urination That Wouldn't Clear Up
Rotimi's Four-Week Search for the Right Diagnosis

Rotimi had burning urination for a month. A previous clinic had treated him for UTI β€” twice β€” but the urine culture kept coming back negative. Mascot Healthcare tested for the right pathogen and cleared the infection within a week.

Composite patient journey Names changed for privacy Mascot Healthcare, Akoka
πŸ“ Note: This is a composite clinical narrative β€” constructed from multiple similar presentations at Mascot Healthcare. It accurately reflects the typical diagnostic experience. Patient details have been generalised for privacy.
The Patient
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Rotimi, 33

Electrical engineer, Ikorodu. Presented with urethral discharge (clear, mucoid), burning on urination, and urethral irritation for 4 weeks. Had been treated once for presumed UTI without improvement.

Non-Gonococcal Urethritis (Chlamydia trachomatis)
How It Started

Treated Twice for the Wrong Infection

Rotimi first noticed the burning on a Monday morning in late October. He put it down to not drinking enough water and drank three extra bottles that day. By Wednesday, there was a small amount of clear discharge. He went to the closest pharmacy, which sent him to a nearby clinic.

The clinic diagnosed him with a urinary tract infection based on symptoms alone and prescribed ciprofloxacin. He completed the five-day course. The burning improved for a week β€” then returned. Back to the clinic; another urine test, another course of antibiotics. The culture came back negative again. The doctor shrugged and said to "drink more water."

Rotimi's partner asked him to please see a different doctor. He found Mascot Healthcare and came in with his previous test results, including both negative urine cultures. The doctor looked at the results, examined the urethral discharge, and said: "Your urine doesn't have bacteria because this isn't a UTI β€” let's test for what it actually is."

Symptoms

Rotimi's Symptoms Over Four Weeks

Non-gonococcal urethritis (NGU) presents differently from both UTI and gonorrhoea β€” subtly enough to be missed without targeted testing.

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Urethral Discharge

Clear to slightly cloudy mucoid discharge β€” more prominent in the morning, sometimes staining underwear.

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Burning on Urination

Dysuria that worsened with the first void of the day; improved temporarily, then returned.

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Urethral Irritation

Persistent itching and discomfort inside the urethra between urination.

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Negative Urine Culture

Standard urine cultures had been run twice β€” both showed no bacterial growth, puzzling previous doctors.

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No Systemic Symptoms

No fever, no loin pain, no frequency urgency β€” pointing away from a UTI pattern.

Before the Clinic

One Month of Misdirected Treatment

Ciprofloxacin BD Γ— 5 days β€” prescribed for presumed UTI; temporary partial improvement.

Second antibiotic course (amoxicillin-clavulanate) β€” no improvement; urine culture again negative.

Increased water intake β€” no change in symptoms.

Cranberry supplement β€” no evidence-based effect on urethritis.

⚠️ Why this matters: Chlamydia-caused urethritis does not grow on standard urine cultures. It requires specific testing. Treating with fluoroquinolones or amoxicillin doesn't cover Chlamydia trachomatis β€” the most common cause of NGU.
At Mascot Healthcare

One Specific Test. One Correct Antibiotic.

The doctor sent a urethral swab for chlamydia test. The result came back positive for Chlamydia trachomatis. This explained everything: the discharge, the burning and the failure to respond to UTI antibiotics.

Treatment: Rotimi's treatment stared and he was advised to abstain from sexual activity for 7 days and to inform his partner for testing and concurrent treatment (to avoid re-infection).

He was also tested for gonorrhoea and syphilis as a routine co-infection screen β€” both negative.

Diagnosis & Treatment

What Was Found β€” and What Happened Next

1

Diagnosis

Non-Gonococcal Urethritis β€” Chlamydia trachomatis

2

Treatment

Doxycycline ; partner treatment; gonorrhoea and syphilis co-screen; abstinence during treatment

3

Follow-up

Symptoms fully resolved by day 5.

Outcome

Rotimi was symptom-free by day 5 of treatment. His partner was tested, found positive, and treated simultaneously. Test of cure confirmed clearance.

What This Story Teaches Us

What Rotimi's Story Teaches Us

Chlamydia is the commonest curable STI globally and a leading cause of urethritis in men. It does not show up on standard urine cultures β€” only specific testing detects it reliably.

The pattern β€” urethral discharge, burning urination, negative urine culture β€” should trigger targeted STI testing, not a repeated UTI antibiotic course.

Key takeaway

Negative urine culture + urethral discharge = test for chlamydia. Standard antibiotics for UTIs don't treat it.

Have discharge or burning urination that antibiotics haven't fixed? Come in for targeted STI testing.

Book an appointment at Mascot Healthcare, Akoka β€” same-day slots often available, 4.9β˜… rated.

Service
STI Screening
Opening Hours
Mon–Sat 9AM–5PM
Location
Akoka, Lagos
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